|
bc_fit
|
BC outbreak data posterior |
|
bc_fit_zeta
|
BC outbreak data hierarchical intervention posterior |
|
BC_LTHC_outbreaks_100Imputs
|
Long Term Health Care facility COVID-19 outbreaks in British Columbia, with 100 imputations of missing data |
|
BC_OSABC_facilitydata
|
Additional covariate data on Long Term Health Care facility COVID-19 outbreaks in British Columbia |
|
cr0eso-package
|
The 'cr0eso' package. |
|
create_pub_tables()
|
Create comparison table for multiple posteriors |
|
hom_extract_posterior_draws()
|
Extract model incidence and R0s from posterior |
|
hom_plot_counterfactual_by_location()
|
plot incidence and counterfactual scenario |
|
hom_plot_critical_times_by_location()
|
Plot the critical time for each location |
|
hom_plot_incidence_by_location()
|
Plot incidence by location as extracted from hierarchical outbreak model. |
|
hom_plot_r0_by_location()
|
Plot r0 by location as extracted from hierarchical outbreak model. |
|
hom_plot_zeta_by_location()
|
Plot zeta by location as extracted from hierarchical outbreak model. |
|
prior_list
|
list of parameterisations for priors |
|
seir_model_fit()
|
SEIR model fitting method to a multiple outbreak model |